Software de registro de imágenes:

  • ITK (the National Library of Medicine Insight Segmentation and Registration Toolkit)
  • ANTs
  • Elastix

Software de interfaz gráfica: 

  • GTK+, or the GIMP Toolkit, is a multi-platform toolkit for creating graphical user interfaces.
  •  Amide's a Medical Image Data Examiner: Amide is a tool for viewing, registering, and analyzing anatomical and functional volumetric medical imaging data sets.
  • (X)MedCon : libmdc from Erik Nolf's (X)MedCon package is used for importing most file formats into AMIDE.
  • DCMTK - DICOM Toolkit : DCMTK provides more expansive support for DICOM files than (X)MedCon. If you plan on reading in DICOM files, especially from clinical systems, you'll want this. A SRPM version which builds DCMTK as a shared library is available from AMIDE's sourceforge page.
  • VolPack : Volume rendering is handled using Philippe Lacroute's volpack volume rendering library. Here is a version that compiles cleanly on Linux and Mac OS X on the sourceforge project page. You can also get the original version from Stanford (hasn't been updated since 1994).
  • FFMPEG (libavcodec) : Outputting sequences of images as MPEG1 movie files requires the the FFMPEG encoding library (libavcodec) . If you're installing a binary version of AMIDE on Linux, it's probably linked against the version of ffmpeg-libs available from rpmfusion.
  • gsl : The GNU Scientific Library (GSL) is needed for performing image alignment using fiducial markers. Many distributions have prebuilt packages for GSL. Information on downloading GSL can be found on the GNU Scientific Library webpage.

Bases de datos:


the most widely-used informatics platform for imaging research